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Sankara Nethralaya
Sankara Nethralaya
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Centre For Bioinformatics
Infrastructure and Facilities:
Computer Hardware:
  • Dedicated Linux Servers:
  • Multicore Clustered Workstations– NVIDIA-Tesla GPU Enabled
  • Dedicated broadband connection
Software:

CLC Genomics workbench
CHARMM for Molecular dynamics Simulations
Scrhodinger Drug Design suite
Geneious NGS analysis software
Genespring suite for microarray analaysis
Opensource Bioinformatics Softwares

In-house Standardized protocols:

  • Next Generation Sequencing Analysis (customized
  • RNA-Seq, SmallRNAand Variant Calling Pipelines)
  • Genome wide association studies (GWAS)
  • Rule based siRNA Design
  • In-house developed pipeline for HighThroughput, Massively parallel Virtual screening
  • Therapeutic peptide design
  • Customized pipeline for Molecular Modeling and Optimization
  • Small and Macromolecular Docking studies
  • Molecular dynamics & Simulation studies
  • HolisiticIdentification of potential therapeutic targets based on Systems Biology approaches
Standardized Protocols :
 
(Pie Chart of Department Activities)